Job Description P45469 Confidence 98.79% Date Thu Jan 5 12:02:46 GMT 2012 Rank 118 Aligned Residues 176 % Identity 18% Template c2nwqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable short-chain dehydrogenase; PDBTitle: short chain dehydrogenase from pseudomonas aeruginosa Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		S	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	.	.	.	.	.	.	.	.	.	.	D	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	.	.	.	.	.	.	.	D	P	I	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Alig confidence																										.	.													.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		S	T	L	F	I	T	G	A	T	S	G	F	G	E	A	C	A	R	R	F	A	E	A	G	.	.	W	S	L	V	L	T	G	R	R	E	E	R	L	Q	A	L	A	G	E	L	S	A	K	T	R	V	L	P	L	T	L	D	V	R	D	R	A	A	X	S	A	A	V	D	N	L	P	E	E	F	A	T	L	R
Template Known Secondary structure							S	S	T	T	T	S	S											T	T	.	.								S													T	T	T	S									T	T											T			G	G	G	S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.																										.																	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.																										.																	.	.
Query Sequence		I	V	F	C	C	L	G	T	T	R	R	E	A	G	S	.	.	.	.	.	.	.	.	.	.	.	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	.	H	M	L	V	V	S	A	M	G	A	N	A	H	S	P	F	.	.	F	Y	N	R	V	K	G	E	M	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.																										.																	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																										.																	.	.
Template Conservation
Template Sequence		G	L	I	N	N	A	G	L	A	L	G	T	D	P	A	Q	S	C	D	L	D	D	W	D	T	X	V	D	T	N	I	K	G	L	L	Y	S	T	R	L	L	L	P	R	L	I	A	H	G	A	G	A	S	I	V	N	L	G	S	V	A	G	K	W	P	Y	P	G	S	H	V	Y	G	G	T	K	A	F	V	E
Template Known Secondary structure																G	G	G														T																			T	T									G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		131	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		E	A	L	I	.	.	.	.	.	.	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M	N	E	T	L	F	A	P	L	F	R	L	L	P	G	N	W	K	S	I	D	A	R	D	V	A	R	V	M	L	A	E	S	M	R	P	E	H	E	G	V	T	I	L
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	F	S	L	N	L	R	C	D	L	Q	G	T	G	V	R	V	T	N	L	E	P	G	L	C	E	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	I	Q	P	E	D	I	A	E	T	I	F	W	I	X	N	Q	P	A	H	L	N	I	N	S	L
Template Known Secondary structure									T	T		T	T	S											S	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B														T	S		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions