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Job DescriptionP45469
Confidence99.84%DateThu Jan 5 12:02:46 GMT 2012
Rank37Aligned Residues211
% Identity13%Templatec2hunB_
PDB info PDB header:lyaseChain: B: PDB Molecule:336aa long hypothetical dtdp-glucose 4,6-dehydratase; PDBTitle: crystal structure of hypothetical protein ph0414 from pyrococcus2 horikoshii ot3
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30.........40. ........50.........60.......
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Query Sequence  MS. . QVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDM. . . . . . . . . . . PGVFNPHDPQLSDALAQVTDPIDIVF
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Template Sequence  MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVV
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TT
TTTS
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TT

GGGGTTTTT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   68.70.........80.........90.........100.........110.. .......120.........130.
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Query Sequence  CCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAM. . . . . . . . . . . . . . . . GANAHSPFFYNRVKGEMEE
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Template Sequence  HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM
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TTSGGGG


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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   132.. .....140.........150.........160...... ...170.........180.........190.........
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Query Sequence  ALI. . . AQNWPKLTIARPSMLLGDRSKQRMNETLFAPL. . . . . . . . . FRLLPGNWKSIDARDVARVMLAESMRPEHEGVT
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Template Sequence  LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREIY
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STT

TTSTTT

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TT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   200..... ....210.
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Query Sequence  ILSSSE. . . LRKRAE
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Template Sequence  NISAGEEKTNLEVVK
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   241........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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