Job Description P45469 Confidence 99.95% Date Thu Jan 5 12:02:46 GMT 2012 Rank 3 Aligned Residues 209 % Identity 15% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.																				.
Query SS confidence																																									.	.	.	.	.	.																				.
Query Sequence		M	S	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	.	.	.	.	.	.	D	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	.	V	T	D	P	I	D	I	V	F	C	C	L	G	T	T
Query Conservation																																									.	.	.	.	.	.																				.
Alig confidence																												.													.	.	.	.	.	.																				.
Template Conservation																												.
Template Sequence		R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	.	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A
Template Known Secondary structure									T	T	T	S													S	S	S	.								S			T	T	T	G	G	G	T	T		T	T								T	T	T													S
Template Predicted Secondary structure																												.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		74	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure							.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	E	A	G	.	.	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	M	L	V	V	S	A	M	G	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	S	P	F	F	Y	N	R	V	K	G	E	M	E	E
Query Conservation							.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R
Template Known Secondary structure			T						S									T													T	T	.									G	G	G	G	B	T			S	S	S	B		T	T	T				B				T	T		T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		132	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	I	.	.	.	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	M	N	E	T	L	F	A	P	L	F	R	L	L	P	G	N	W	K	S	I	D	A	R	D	V	A	R	V	M	L	A	E	S	M
Query Conservation					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E
Template Known Secondary structure																					S			S	T	T	S	S						T	T	T		S													T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		192	.	.				.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.
Predicted Secondary structure					.	.	.												.	.	.	.
Query SS confidence					.	.	.												.	.	.	.
Query Sequence		R	P	E	.	.	.	H	E	G	V	T	I	L	S	S	S	E	.	.	.	.	L	R	K	R	A	E
Query Conservation					.	.	.												.	.	.	.
Alig confidence					.	.	.												.	.	.	.
Template Conservation
Template Sequence		N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E
Template Known Secondary structure		T	G	G	G	T	T	T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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