Job Description P45469 Confidence 99.79% Date Thu Jan 5 12:02:46 GMT 2012 Rank 58 Aligned Residues 207 % Identity 14% Template c1n7gB_ PDB info PDB header:lyase Chain: B: PDB Molecule:gdp-d-mannose-4,6-dehydratase; PDBTitle: crystal structure of the gdp-mannose 4,6-dehydratase2 ternary complex with nadph and gdp-rhamnose. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.													.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	.	.	.	.	.	.	.	.	.	.	.	.	L	G	D	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	D	P	I	D	I	V	F	C	C
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		K	I	A	L	I	T	G	I	T	G	Q	D	G	S	Y	L	T	E	F	L	L	G	K	G	.	.	Y	E	V	H	G	L	I	R	R	S	S	N	F	N	T	Q	R	I	N	H	I	Y	I	D	K	A	L	M	K	L	H	Y	A	D	L	T	D	A	S	S	L	R	R	W	I	D	V	I	K	P	D	E	V	Y
Template Known Secondary structure								T	T	T	S												T	T	T	.	.											S	S				T	T	T									S								T	T															S
Template Predicted Secondary structure																										.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	T	T	.	.	.	.	R	R	E	A	G	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	M	L	V	V	S	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E
Query Conservation						.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	A	A	Q	S	H	V	A	V	S	F	E	I	P	D	Y	T	A	D	V	V	A	T	G	A	L	R	L	L	E	A	V	R	S	H	T	I	D	S	G	R	T	V	K	Y	Y	Q	A	G	S	S	E	M	F	G	S	T	P	P	P	Q	S	E	T	T	P	F	H	P	R	S	P	Y	A	A	S	K	C	A
Template Known Secondary structure															S									T																													G	G	G	G	T	T	S		S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		129	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.														.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure								.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	E	A	L	I	.	.	.	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M	N	E	T	L	F	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	R	L	L	P	G	N	W	K	S	I	D	A	R	D	V	A	R	V	M	L	A	E	S	M	R
Query Conservation								.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	W	Y	T	V	N	Y	R	E	A	Y	G	L	F	A	C	N	G	I	L	F	N	H	E	S	P	R	R	G	E	N	F	V	T	R	K	I	T	R	A	L	G	R	I	K	V	G	L	Q	T	K	L	F	L	G	N	L	Q	A	S	R	D	W	G	F	A	G	D	Y	V	E	A	M	W	L	M	L	Q	Q
Template Known Secondary structure																												T	T	S		T	T	S														T	T	S							S		S	S																					S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		193	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		P	E	H	E	G	V	T	I	L	S	S	S	E	.	.	.	L	R	K	R	A	E
Query Conservation															.	.	.
Alig confidence				.											.	.	.
Template Conservation				.
Template Sequence		E	K	.	P	D	D	Y	V	V	A	T	E	E	G	H	T	V	E	E	F	L	D
Template Known Secondary structure		S	S	.									S
Template Predicted Secondary structure				.
Template SS confidence
		272	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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