Job Description P45469 Confidence 97.74% Date Thu Jan 5 12:02:46 GMT 2012 Rank 306 Aligned Residues 156 % Identity 11% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40													.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	.	.	.	.	.	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	D	P	I	D	I
Query Conservation																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K	D	A	D	V
Template Known Secondary structure							S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.																110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	C	C	L	G	T	T	R	R	E	A	G	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	.	A	Q	H	M	L	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	M	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E	M
Query Conservation																																							.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	P	A	N	T	N	A	Y	I	A	M	K	S	A	P	S	L	P	A	K	N	F	T	A	M	L	R	L	D	H	N	R	A
Template Known Secondary structure												T	T																									S		T	T							S	S	S											T		T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	L	I	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	Q	I	A	A	K	T	G	K	P	V	S	S	I	E	K	L	F	V	W	G	N	H	S	P	T	M	Y
Template Known Secondary structure										T			G	G	G			S					B		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions