Job Description P02932 Confidence 100.00% Date Thu Jan 5 10:57:46 GMT 2012 Rank 8 Aligned Residues 274 % Identity 14% Template d3prna_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.90

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		L	D	V	Y	G	K	V	K	A	M	H	Y	M	S	D	N	A	.	.	.	.	S	K	D	G	D	Q	S	Y	I	R	F	G	F	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	R	W	E	A	E	F	A	G	N	K	A	E	S	D	T	A	Q	Q	K	T	R	L	A	F	A	G	L	K	Y	K	D	L
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																																					.	.	.																	.
Template Conservation																																																											.	.	.																	.
Template Sequence		I	S	L	N	G	Y	G	R	F	G	L	Q	Y	V	E	D	R	G	V	G	L	E	D	T	I	I	S	S	R	L	R	I	N	I	V	G	T	T	E	T	D	Q	G	V	T	F	G	A	K	L	R	M	Q	W	D	D	G	.	.	.	D	A	F	A	G	T	A	G	N	A	A	Q	F	W	T	S	.	Y	N	G
Template Known Secondary structure																T	T		S	T	T			S																		T	T	S													T	T	.	.	.		G	G	G				B									.		T	T
Template Predicted Secondary structure																																																											.	.	.																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	F	D	Y	G	R	N	L	G	A	L	Y	D	V	E	A	W	T	D	M	F	P	E	F	G	G	D	.	.	.	.	.	.	.	.	.	.	S	S	A	Q	T	D	N	F	M	T	K	R	A	S	G	L	A	T	Y	R	N	T	D	F	F	G	V	I	D	G	L	N	L	T	L	Q	Y	Q	G	K	N	E
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		V	T	V	S	V	G	N	V	D	T	A	F	D	S	V	A	L	T	Y	D	S	E	M	G	Y	E	W	S	S	F	G	D	A	Q	S	S	F	F	A	Y	N	S	K	Y	D	A	S	G	A	L	D	N	Y	N	G	I	A	V	T	Y	S	I	S	G	V	N	L	Y	L	S	Y	V	D	.	.	.	.	.	P	D
Template Known Secondary structure								S								S	S	S	T	T	T	T		B	T	T	T	T	B		T	T	S			S								S			T	T	S	T	T	T	T											S	S										.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Sequence		Q	T	V	D	S	S	L	V	T	E	E	F	G	I	A	A	D	W	S	N	D	M	I	S	L	A	A	A	Y	T	T	D	A	.	.	.	.	.	.	.	.	.	.	.	.	G	G	I	V	D	N	D	I	A	F	V	G	A	A	Y	K	F	N	D	A	G	T	V	G	L	N	W	Y	D	N	G	.	.	.	.
Template Known Secondary structure		T	T	S		G	G	G	S													S	S										S	G	.	.	.	.	.	.	.	.	.	.	.	.	G	G		T	T													S	S	S											T	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.													.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	F	A	N	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I
Query Conservation
Alig confidence		.	.	.																			.												.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																			.												.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	L	S	T	A	G	D	Q	V	T	L	Y	G	N	Y	A	F	G	A	.	T	T	V	R	A	Y	V	S	D	I	D	.	.	.	.	.	.	.	.	R	A	G	A	D	T	A	Y	G	I	G	A	D	Y	Q	F	A	E	G	V	K	V	S	G	S	V	Q	S	.	.	.	.	.	.	.	.	.	G	F
Template Known Secondary structure		.	.	.	T	S	T	T		S											T	T	.												.	.	.	.	.	.	.	.	S	T	T															T	T										.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure		.	.	.																			.												.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
					217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.									.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.										.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	E	T	V	A	D	V	G	V	R	F	D	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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