Job Description P02932 Confidence 94.93% Date Thu Jan 5 10:57:46 GMT 2012 Rank 35 Aligned Residues 240 % Identity 11% Template c3bryB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux Resolution 3.20 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	G	F	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	R	W	E	A	E	F	A	G	N	K	A	E	S	D	T	A	Q	Q	K	T	R	L	A	F	A	G	L	K	Y	K	D	L	G	S	F	D	Y	G	R	N	L	G	A	L	Y	D	V	E	A	W	T	D	M	F	P	E	F	G	G	D	S	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	P	F	S	A	A	Y	H	V	T	D	K	L	T	V	G	A	S	V	D	A	V	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	L	N	L	G	T	L	L	D	V	S	Q	I	G	T	L	A	G	Q	G	R	V	S	G
Template Known Secondary structure											S	S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S		S	S	S	S	T	T	T	S	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																																.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	T	D	N	F	M	T	K	R	A	S	G	L	A	T	Y	R	N	T	D	F	F	G	V	I	D	G	L	N	L	T	L	Q	Y	Q	G	K	N	E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		T	L	V	P	T	L	L	G	V	P	G	L	S	G	G	Y	I	D	F	S	G	V	Q	A	W	G	I	G	G	R	L	G	L	T	Y	Q	V	T	P	.	.	.	.	.	.	.	.	.	D	T	R	I	G	A	A	Y	Q	A	K	T	H	V	G	D	L	T	G	Q	A	T	L	S	A	V	G	N	I	P	L	K
Template Known Secondary structure		T	T	T	T	T	T	T	S	S	S			S																										T	.	.	.	.	.	.	.	.	.	T											B	B											B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.																				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	.	A	N	N	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D
Query Conservation																							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	V	T	V	R	N	F	Q	M	P	A	Q	L	T	V	G	I	S	H	Q	F	N	D	Q	L	S	V	S	A	D	Y	Q	R	V	F	W	S	S	V	M	K	D	M	N	V	G	F	V	Q	S	G	S	A	A	N	L	D	L	S	L	P	Q	N	Y	R	D	I	S	V	F	G	I	G	A	E	Y	R	Y	N
Template Known Secondary structure											B												S	S	S	S												G	G	G			S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		A	K	W	T	F	R	G	G	F	H	Y	.	.	.	.	.	.	.	.	.	.	.	A	Q	E	T	T	S	L	T	G	G	V	S	Y	A	I	G	K	N	D	V	I	D	F	A	L	S	V	A	L	R	K	T	S	.	.	.	V	T	H	S	Q	V	N	A	V	I	A	Y	Q	K	R	F
Template Known Secondary structure		T	T										.	.	.	.	.	.	.	.	.	.	.															S	S	T	T													B			.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.												.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.				.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions