Job Description P02932 Confidence 95.46% Date Thu Jan 5 10:57:46 GMT 2012 Rank 34 Aligned Residues 180 % Identity 12% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	I	D	G	L	N	L	T	L	Q	Y	Q	G	K	N	E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		L	F	T	G	V	M	A	T	Y	T	D	T	D	A	S	A	D	L	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A	G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y
Template Known Secondary structure																		T	T																			T	T	S																			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1155	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.
												241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	N	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	.	F	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G
Query Conservation		.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.	.	.	.													.																											.
Template Conservation																																	.	.	.	.																																								.
Template Sequence		R	Y	H	L	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	P	L	V	.	.	.	.	G	R	T	G	V	V	S	G	K	T	F	S	G	K	D	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	S	R	K	D	S	R	M	.	L	Y	G	V	G
Template Known Secondary structure							T	T																									.	.	.	.														S	S																S									.
Template Predicted Secondary structure																																	.	.	.	.																																								.
Template SS confidence
		1235	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.					.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.		.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	.	.	.	.	.	Y	N	T	D	D	A	I	N	A	N	I	R	Y	S	F
Template Known Secondary structure							T	T	T												S		S	.	.	.	.	.	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		1341	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.						.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions