Return to main results Retrieve Phyre Job Id

Job DescriptionP02932
Confidence90.67%DateThu Jan 5 10:57:46 GMT 2012
Rank41Aligned Residues185
% Identity14%Templatec2qomB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190......... 200.........210.........220.........230.........240
Predicted Secondary structure 


















.



















Query SS confidence 





































.








































Query Sequence  VIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGG. SDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDAN
Query Conservation                                        .                                     
   
Alig confidence 





































.








































Template Conservation   
 
                        
 
                                            

   
Template Sequence  LFTGFTVTHTDSSASADVFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFATRDYSTHSWYAGAEAGYRYH
Template Known Secondary structure 
SSTTSS




Template Predicted Secondary structure 









Template SS confidence 















































































   1078.1080.........1090.........1100.........1110.........1120.........1130.........1140.........1150.......
 
   241........250........ .260.........270....... ..280.........290....
Predicted Secondary structure  .......






......






......




.......
Query SS confidence  . . . . . . .

















. . . . . .


















. . . . . .
















. . . . . . .
Query Sequence  . . . . . . . NIYLATFYSETRKMTPIT. . . . . . GGFANKTQNFEAVAQYQFD. . . . . . FGLRPSLGYVLSKGKDI. . . . . . .
Query Conservation  .......       
          ......               
   ......        
        .......
Alig confidence  .......

















......


















......
















.......
Template Conservation        
 
   
           
                    
                                  
Template Sequence  VTEDAWIEPQAELVYGSVSGKQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKSFSGKWKVTARAGLGYQFDLLANGETVLR
Template Known Secondary structure  TT

B



SB




T
TTB

Template Predicted Secondary structure 


























Template SS confidence 















































































   1161........1170.........1180.........1190.........1200.........1210.........1220.........1230.........1240
 
   295....300.........310.........320.........330.........340.........350.
Predicted Secondary structure  ......

























Query SS confidence  . . . . . .
























































Query Sequence  . . . . . . EGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF
Query Conservation  ......             

  
           
                    

 
  
Alig confidence  ......




































.....














Template Conservation                      
                      .....         



 
Template Sequence  DASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGK. . . . . YNVDNAVNANFRYSF
Template Known Secondary structure 
TTSS

SSSSTTT
.
SSS.....S

Template Predicted Secondary structure 
















.....


Template SS confidence 






























































   1243......1250.........1260.........1270.........1280..... ....1290.........1300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions