Job Description P02932 Confidence 23.19% Date Thu Jan 5 10:57:46 GMT 2012 Rank 53 Aligned Residues 147 % Identity 13% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	K	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	S	I	R	G	A	L	V	L	G	Y	E	G	W	L	A	G	Y	Q	M	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	K	S	R	V	T	Q	S	N	F	A	V	G	Y	K	T	D	E	F	Q	L	H	T	N	V	N	D	G	T	E	F	G	G	S	I	Y	Q	K	V	N	K	K
Template Known Secondary structure		S												T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S													S	S									T	T	T											S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.														.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		266	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	.	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A
Query Conservation															.
Alig confidence															.																																													.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		L	E	T	A	V	N	L	A	W	T	A	G	N	S	N	T	R	F	G	I	A	A	K	Y	Q	I	D	P	D	A	C	F	S	A	K	V	N	N	S	S	L	I	G	L	G	Y	T	Q	T	L	K	P	G	I	K	L	T	L	.	.	.	.	.	S	A	L	L	D	G	K	N	V	N	A	G	G	H	K	L	G
Template Known Secondary structure												T	T	S	S														T	T									S	S	S											S	S	S						.	.	.	.	.					S	T	T		G	G	G	T
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		345	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	T	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	E	F	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions