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Job DescriptionP22188
Confidence99.73%DateThu Jan 5 11:38:45 GMT 2012
Rank30Aligned Residues133
% Identity20%Templated2jfga2
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain
Resolution1.52

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   338.340.........350....... ..360.........370.........380.........390.........400.........410......
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Query Sequence  PVCGRMEVFTAPGKPTVVVD. YAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNP
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Template Sequence  GLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLH. . VDGTLHLLLG. . GDGKSADFSPLARYLNGDNVRLYCF. . . .
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   298.300.........310.........320.........330.... .....340.... .....350.........360.........
 
   417..420.........430.........440.........450.........460.........470.........480.... .....490
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Query Sequence  RTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDR. . . . . VTVARL
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Template Sequence  . GRDGAQLAA. . . . . . LRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACA. SLDQFKN. . . . FEQRGNEFARLAKEL
Template Known Secondary structure  .STTT......TSGGG
SSGGG

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   370........ .380.........390.........400.........410.... .....420. ........430......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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