Job Description P22188 Confidence 100.00% Date Thu Jan 5 11:38:45 GMT 2012 Rank 17 Aligned Residues 240 % Identity 17% Template d2gc6a2 SCOP info Ribokinase-like MurD-like peptide ligases, catalytic domain Folylpolyglutamate synthetase Resolution 1.90

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		L	S	Q	L	N	E	R	L	S	A	L	A	G	R	F	Y	H	E	P	S	D	N	L	R	L	V	G	V	T	G	T	N	G	K	T	T	T	T	Q	L	L	A	Q	W	S	Q	L	L	G	E	I	S	A	V	M	G	T	V	G	.	.	.	.	.	.	.	N	G	L	L	G	K	V	I	P	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence														.	.																																														.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation														.	.
Template Sequence		L	A	D	H	R	R	I	L	T	L	L	H	.	.	A	L	G	N	P	Q	Q	Q	G	R	Y	I	H	V	T	G	T	N	G	K	G	S	A	A	N	A	I	A	H	V	L	E	A	S	G	L	T	V	G	L	Y	T	A	P	F	I	M	R	F	N	E	R	I	M	I	D	H	E	P	I	P	D	A	A	L	V
Template Known Secondary structure														.	.		T	T		G	G	G	S	S								S	S	S															T	T								S	S		S	S		G	G	G	G				T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
																				155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	N	T	T	G	S	A	V	D	V	Q	H	E	L	A	G	L	V	D	Q	G	A	T	F	C	A	M	E	V	S	S	H	G	L	V	Q	H	R	V	A	A	L	K	F	A	A	S	V	F	T	N	L	S	R	D	H	L	D	Y	H	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation																																																						.
Template Sequence		N	A	V	A	F	V	R	A	A	L	E	R	L	Q	Q	Q	Q	A	D	F	N	V	T	E	F	E	F	I	T	A	L	G	Y	W	Y	F	R	Q	R	Q	V	D	V	A	V	I	E	V	G	I	G	G	.	D	T	D	S	T	N	V	I	T	P	V	V	S	V	L	T	E	V	A	L	D	H	Q	K	L	L	G
Template Known Secondary structure																		S	T	T																				T	T		S							S	S	S	S	.	T	T	S	T	T		S				S									S	T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	E	H	Y	E	A	A	K	W	L	L	Y	S	E	H	H	C	G	Q	A	I	I	N	A	D	D	E	V	G	R	R	W	L	A	K	L	P	D	A	V	A	V	S	M	E	D	H	I	N	P	N	C	H	G	R	W	L	K	A	T	E	V	N	Y	H	D	S	G	A	T	I	R	F	S	S	S	W	G	D
Query Conservation
Alig confidence																.	.																																			.	.	.	.	.	.
Template Conservation																.	.																																			.	.	.	.	.	.
Template Sequence		H	T	I	T	A	I	A	K	H	A	G	I	I	K	.	.	R	G	I	P	V	V	T	G	N	L	V	P	D	A	A	A	V	V	A	A	K	V	A	T	T	G	S	Q	W	L	R	F	D	R	.	.	.	.	.	.	D	F	S	V	P	K	A	K	L	H	G	W	G	Q	R	F	T	Y	E	D	Q	D	G	R
Template Known Secondary structure		S	S									T	T			.	.	T	T																								T						B	T	T	.	.	.	.	.	.	T										S	S	S								T	T
Template Predicted Secondary structure																.	.																																			.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		297	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure				.																										.	.	.	.	.	.
Query SS confidence				.																										.	.	.	.	.	.
Query Sequence		G	E	.	I	E	S	H	L	M	G	A	F	N	V	S	N	L	L	L	A	L	A	T	L	L	A	L	G	.	.	.	.	.	.	Y	P	L	A	D	L	L	K	T	A	A	R	L	Q
Query Conservation				.																										.	.	.	.	.	.
Alig confidence				.																										.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	D	L	E	V	P	L	V	G	D	Y	Q	Q	R	N	M	A	I	A	I	Q	T	A	K	V	Y	A	K	Q	T	E	W	P	L	T	P	Q	N	I	R	Q	G	L	A	A	S	H
Template Known Secondary structure								S			S																					T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions