Job Description P22188 Confidence 99.83% Date Thu Jan 5 11:38:45 GMT 2012 Rank 26 Aligned Residues 141 % Identity 16% Template d1p3da2 SCOP info MurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain Resolution 1.70

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		338	.	340	.	.	.	.	.	.	.	.					.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure													.	.	.	.																												.
Query SS confidence													.	.	.	.																												.
Query Sequence		P	V	C	G	R	M	E	V	F	T	A	.	.	.	.	P	G	K	P	T	V	V	V	D	Y	A	H	T	P	D	A	L	E	K	A	L	Q	A	A	R	L	H	.	C	A	G	K	L	W	C	V	F	G	C	G	G	D	R	D	K	G	K	R	P	L	M	G	A	I	A	E	E	F	A	D	V	A	V	V	T
Query Conservation													.	.	.	.																												.
Alig confidence													.	.	.	.																												.
Template Conservation
Template Sequence		G	A	G	R	R	F	D	Q	L	G	E	F	I	R	P	N	G	K	V	R	L	V	D	D	Y	G	H	H	P	T	E	V	G	V	T	I	K	A	A	R	E	G	W	G	D	K	R	I	V	X	I	F	Q	P	H	R	Y	S	R	T	R	D	L	F	D	D	F	V	Q	V	L	S	Q	V	D	A	L	I	X	L
Template Known Secondary structure				T	T	S	S									T	T												S																	S	S									B								T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		413	.	.	.	.							.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		D	D	N	P	R	.	.	.	.	.	.	T	E	E	P	R	A	I	I	N	D	I	L	A	G	M	L	D	A	G	H	A	K	V	M	E	G	R	A	E	A	V	T	C	A	V	M	Q	A	K	E	N	D	V	V	L	V	A	G	K	G	H	E	D	Y	Q	I	V	G	N	Q	R	L	D	Y	S	D	R	V	T
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.														.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	Y	A	A	G	E	A	P	I	V	G	A	D	S	K	S	L	C	R	S	I	R	N	.	.	L	G	K	V	D	P	I	L	V	S	D	T	S	Q	L	G	D	V	L	D	Q	I	I	Q	D	G	D	L	I	L	A	Q	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	S	K	I
Template Known Secondary structure				B		T	T					T	T		S											.	.		T	S							S		G	G	G											T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																										.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.			.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460															.	.	.	.	.
		487	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	R	L	L	G	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	G	L	A	E	S	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		466	.	.	.	470	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions