Job Description P22188 Confidence 100.00% Date Thu Jan 5 11:38:45 GMT 2012 Rank 24 Aligned Residues 205 % Identity 20% Template d1j6ua3 SCOP info Ribokinase-like MurD-like peptide ligases, catalytic domain MurCDEF Resolution 2.30

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		A	L	A	G	R	F	Y	H	E	P	S	D	N	L	R	L	V	G	V	T	G	T	N	G	K	T	T	T	T	Q	L	L	A	Q	W	S	Q	L	L	G	E	I	S	A	V	.	M	G	T	V	G	N	G	L	L	G	K	V	I	P	T	E	N	T	T	G	S	A	V	D	V	Q	H	E	L	A	G	L	V	D
Query Conservation																																															.
Alig confidence																																															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	H	Y	F	R	D	T	L	K	R	E	K	K	E	E	F	A	V	T	G	T	D	G	K	T	T	T	T	A	X	V	A	H	V	L	K	H	L	R	K	S	P	T	V	F	L	G	G	I	X	D	S	L	E	H	G	N	Y	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							S	S	S															T	T								S	S			T	T	S	T	T	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	T	F	C	A	M	E	V	S	S	H	G	L	V	Q	H	R	V	A	A	L	K	F	A	A	S	V	F	T	N	L	S	R	D	H	L	D	Y	H	G	D	M	E	H	Y	E	A	A	K	W	L	L	Y	S	E	H	H	C	G	Q	A	I	I	N	A	D	D	E	V	G	R	R	W	L	A	K	L	P
Query Conservation
Alig confidence		.															.	.	.																																						.																				.	.	.	.	.
Template Conservation		.															.	.	.																																						.																				.	.	.	.	.
Template Sequence		.	G	N	G	P	V	V	Y	E	L	D	E	S	E	E	.	.	.	F	F	S	E	F	S	P	N	Y	L	I	I	T	N	A	R	G	D	H	L	E	N	Y	G	N	S	L	T	R	Y	R	S	A	F	E	K	I	.	S	R	N	T	D	L	V	V	T	F	A	E	D	E	L	T	S	H	L	.	.	.	.	.
Template Known Secondary structure		.		S	S								T	T	S	G	.	.	.	G	G	G	G				S												G	G	G	G	T	T													.			T		S						T	T		T	T	T	G	G	G	.	.	.	.	.
Template Predicted Secondary structure		.															.	.	.																																						.																				.	.	.	.	.
Template SS confidence
			150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	A	V	A	V	S	M	E	D	H	I	N	P	N	C	H	G	R	W	L	K	A	T	E	V	N	Y	H	D	S	G	A	T	I	R	F	S	S	S	W	G	D	G	.	E	I	E	S	H	L	M	G	A	F	N	V	S	N	L	L	L	A	L	A	T	L	L	A	L	G	Y	P	L	A	D	L	L	K	T	A
Query Conservation																																													.
Alig confidence		.	.	.	.	.	.	.	.																																				.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	D	V	T	F	G	V	K	K	G	T	Y	T	L	E	X	R	S	A	S	R	A	E	Q	K	A	X	V	E	K	N	G	K	R	Y	L	E	L	K	L	K	V	P	G	F	H	N	V	L	N	A	L	A	V	I	A	L	F	D	S	L	G	Y	D	L	A	P	V	L	E	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.		S					S	S	S	S	S										S	S									T	T									S	S		S																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		334	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	F	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions