Job Description P22188 Confidence 36.56% Date Thu Jan 5 11:38:45 GMT 2012 Rank 322 Aligned Residues 143 % Identity 13% Template c3ojcD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative aspartate/glutamate racemase; PDBTitle: crystal structure of a putative asp/glu racemase from yersinia pestis Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		R	Y	I	P	Q	A	I	A	Q	G	V	A	A	I	I	A	E	.	A	K	D	E	A	T	D	G	E	I	R	E	M	H	G	V	P	V	I	Y	L	S	Q	L	N	E	R	L	S	A	L	A	G	R	F	Y	H	E	P	S	D	N	L	R	L	V	G	V	T	G	T	N	G	K	T	T	T	T	Q	L	L	A
Query Conservation																			.
Alig confidence																			.																				.	.	.												.	.	.	.	.	.
Template Conservation																																							.	.	.												.	.	.	.	.	.
Template Sequence		N	A	A	I	S	L	K	H	A	G	A	E	V	I	V	V	C	T	N	T	X	H	K	V	A	D	D	I	E	A	A	C	G	L	P	L	L	.	.	.	H	I	A	D	A	T	A	V	Q	I	K	.	.	.	.	.	.	Q	Q	G	I	D	K	I	G	L	L	G	T	R	Y	T	X	E	Q	G	F	Y	R	G
Template Known Secondary structure											T							S	S	S	G	G	G	G	G									T	S		B		.	.	.												.	.	.	.	.	.		T	T								S							S	T	T	T
Template Predicted Secondary structure																																							.	.	.												.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		Q	W	S	Q	L	L	G	E	I	S	A	V	M	G	T	V	.	.	.	.	.	G	N	G	L	L	G	K	V	I	P	T	E	N	T	T	G	S	A	V	D	V	Q	H	E	L	A	G	L	V	D	Q	G	A	T	F	C	A	M	E	V	S	S	H	G	L	V	Q	H	R	V	A	A	L	K	F	A	A	S	V
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																																									.	.	.
Template Conservation																																																															.	.	.
Template Sequence		R	L	T	E	K	H	G	I	E	V	I	T	P	D	D	T	D	R	E	A	V	N	R	I	I	Y	E	E	L	C	L	G	I	I	S	E	T	S	R	D	A	Y	R	R	V	I	K	K	L	E	A	Q	G	V	Q	G	I	I	F	G	C	.	.	.	T	E	I	T	L	L	V	N	A	Q	D	A	S	V	P	V
Template Known Secondary structure																													T	G	G	G	T																				T	T		S						S	.	.	.	T								G	G	G		S	S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		204
Predicted Secondary structure
Query SS confidence
Query Sequence		F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		215

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions