Job Description P22188 Confidence 96.42% Date Thu Jan 5 11:38:45 GMT 2012 Rank 36 Aligned Residues 97 % Identity 12% Template c3eh0C_ PDB info PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n- PDBTitle: crystal structure of lpxd from escherichia coli Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		M	A	D	R	N	L	R	D	L	L	A	P	W	V	P	.	.	.	D	A	P	S	R	A	L	R	E	M	T	L	D	S	R	V	A	A	A	G	D	L	F	V	A	V	V	G	H	Q	A	D	G	R	R	Y	I	P	Q	A	I	A	Q	G	V	A	A	I	I	A	E	A	K	D	E	A	T	D	G	E	I	R
Query Conservation																	.	.	.
Alig confidence																	.	.	.												.														.	.	.	.	.	.																												.	.	.	.
Template Conservation																															.														.	.	.	.	.	.																												.	.	.	.
Template Sequence		M	A	S	I	R	L	A	D	L	A	Q	Q	L	D	A	E	L	H	G	D	G	D	I	V	I	T	G	V	A	.	S	M	Q	S	A	Q	T	G	H	I	T	F	M	.	.	.	.	.	.	V	N	P	K	Y	R	E	H	L	G	L	C	Q	A	S	A	V	V	M	T	Q	D	D	L	P	F	A	.	.	.	.
Template Known Secondary structure														T	T					S		S									.		T	T	T			T	T						.	.	.	.	.	.			G	G	G	G	T	T	G	G	G				S						S	T	T	G	G	G		.	.	.	.
Template Predicted Secondary structure																															.														.	.	.	.	.	.																												.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	H	G	V	P	V	I	Y	L	S	Q	L	N	E	R	L	S	A	L	A	G	R	F	Y	H	E	P	S	D	N	L	R	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	S	A	A	L	V	V	K	N	P	Y	L	T	Y	A	R	M	A	Q	I	L	D	T	T	P	Q	P	A	Q	N	I
Template Known Secondary structure		.	.	.	S	S						S													T						S		S	S	B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions