Job Description P22188 Confidence 38.74% Date Thu Jan 5 11:38:45 GMT 2012 Rank 313 Aligned Residues 138 % Identity 8% Template c2jfzB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of helicobacter pylori glutamate racemase2 in complex with d-glutamate and an inhibitor Resolution 1.86 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																		.	.																						.
Query SS confidence																		.	.																						.
Query Sequence		R	R	Y	I	P	Q	A	I	A	Q	G	V	A	A	I	I	.	.	A	E	A	K	D	E	A	T	D	G	E	I	R	E	M	H	G	V	P	V	I	.	Y	L	S	Q	L	N	E	R	L	S	A	L	A	G	R	F	Y	H	E	P	S	D	N	L	R	L	V	G	V	T	G	T	N	G	K	T	T	T	T	Q
Query Conservation																		.	.																						.
Alig confidence																		.	.																						.														.	.	.	.	.	.	.															.
Template Conservation																																																							.	.	.	.	.	.	.															.
Template Sequence		L	E	A	L	D	F	F	K	P	H	E	I	E	L	L	I	V	A	C	N	T	A	S	A	L	A	L	E	E	M	Q	K	Y	S	K	I	P	I	V	G	V	I	E	P	S	I	L	A	I	K	R	Q	V	.	.	.	.	.	.	.	E	D	K	N	A	P	I	L	V	L	G	T	K	A	.	T	I	Q	S	N
Template Known Secondary structure									G	G	G	T		S													T							T		S	S					S	S												.	.	.	.	.	.	.			T	T	S										.					T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.															.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	Q	W	S	Q	L	L	G	E	I	S	A	V	M	G	T	V	G	N	G	L	L	G	K	V	I	P	T	E	N	T	T	G	S	A	V	D	V	Q	H	E	L	A	G	L	V	D	Q	G	A	T	F	C	A	M	E	V	S	S	H	G	L	V	Q	H	R	V	A
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		A	Y	D	N	A	L	K	Q	Q	G	Y	.	L	N	I	S	H	L	A	T	S	L	F	V	P	L	I	E	E	S	I	L	E	G	E	L	L	E	T	C	M	H	Y	Y	F	T	P	L	E	I	L	P	E	V	I	I	L	G	C	T	H	F	P	L	I	A	Q	K	I	E
Template Known Secondary structure										T	T		.									T	T							T	T			S	S												T	T			S			S						S	T	T	G	G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions