Return to main results Retrieve Phyre Job Id

Job DescriptionP22188
Confidence81.77%DateThu Jan 5 11:38:45 GMT 2012
Rank124Aligned Residues147
% Identity14%Templatec2jfoB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of enterococcus faecalis glutamate2 racemase in complex with d- and l-glutamate
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.... .....70.........80.........90.........100.........110.........120......
Predicted Secondary structure 


..




























Query SS confidence 















. .





























































Query Sequence  RRYIPQAIAQGVAAII. . AEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQL
Query Conservation 
 

  
   

   
..                  
 
 
 
   

  

            

 









  
Alig confidence 















..




















...















.....









.





Template Conservation        
   
 
 








   
  

    



...



  
  
      .....  





  .

 
  
Template Sequence  WEMADFLLKKRIKMLVIACNTATAVALEEIKAALPIPVV. . . GVILPGARAAVKVTKN. . . . . NKIGVIGTLG. TIKSAS
Template Known Secondary structure  TTT
S


SS
...
SS
SS.....S
.TT
Template Predicted Secondary structure 













...





.....

.


Template SS confidence 















































































   56...60.........70.........80.........90.... .....100.........110 .........120 ......
 
   127..130.........140.........150.........160. ........170.........180.........190......... 200....
Predicted Secondary structure 

















.













.

Query SS confidence 


































.





































.




Query Sequence  LAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTGS. AVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKF. AASVF
Query Conservation 
  

   
       
              

  .   
   
           


 
  
          
.




Alig confidence 


































.





































.




Template Conservation 
   
        
       

  

 
          
   
  
     
 






 
 
   
       
 

Template Sequence  YEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVAKKIVAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLI
Template Known Secondary structure  TT
TT

TTTT
SSSTTGGGGT

S
STTGGGG
TT
Template Predicted Secondary structure 



























Template SS confidence 















































































   127..130.........140.........150.........160.........170.........180.........190.........200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions