Job Description P22188 Confidence 21.35% Date Thu Jan 5 11:38:45 GMT 2012 Rank 442 Aligned Residues 127 % Identity 13% Template c2bx6A_ PDB info PDB header:transduction protein Chain: A: PDB Molecule:xrp2 protein; PDBTitle: crystal structure of the human retinitis pigmentosa2 protein 2 (rp2) Resolution 2.1 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																			.	.
Query SS confidence																																	.	.																			.	.
Query Sequence		M	A	D	R	N	L	R	D	L	L	A	P	W	V	P	D	A	P	S	R	A	L	R	E	M	T	L	D	S	R	V	.	.	A	A	A	G	D	L	F	V	A	V	V	G	H	Q	A	D	G	R	.	.	R	Y	I	P	Q	A	I	A	Q	G	V	A	A	I	I	A	E	A	K	D	E	A	T	D	G	E	I
Query Conservation																																	.	.																			.	.
Alig confidence																																	.	.																			.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		V	P	I	P	T	T	E	E	L	K	A	V	R	V	S	T	E	A	N	R	S	I	V	P	I	S	R	G	Q	R	Q	K	S	S	D	E	S	C	L	V	V	L	F	A	G	D	Y	T	I	A	N	A	R	K	L	I	D	E	M	V	G	K	G	F	F	L	V	Q	T	K	E	V	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					S					T	S			B			T	T	T		S	S					T	T	S			S											S	S	T	T															T	T										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	M	H	G	V	P	V	I	Y	L	S	Q	L	N	E	R	L	S	A	L	A	G	R	F	Y	H	E	P	S	D	N	L	R	L	V	G	V	T	G	T	N	G	K	T	T	T	T	Q	L	L	A	Q	W	S	Q	L	L	G	E	I	S	A	V	M	G	T	V	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.																										.						.								.
Template Conservation		.	.	.	.	.	.	.																										.						.								.
Template Sequence		.	.	.	.	.	.	.	S	M	K	A	E	D	A	Q	R	V	F	R	E	K	A	P	D	F	L	P	L	L	N	K	G	.	P	V	I	A	L	.	E	F	N	G	D	G	A	.	V	E	V	C	Q	L	I	V	N	E	I	F	N	G	T	K	M	F	V	S	E	S
Template Known Secondary structure		.	.	.	.	.	.	.												G	G	G	G	G	G	T	G	G	G	S	T	T	S	.						.				S	T	T		.													T	T	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.																										.						.								.
Template SS confidence
									271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300		.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions