Job Description P22188 Confidence 30.37% Date Thu Jan 5 11:38:45 GMT 2012 Rank 362 Aligned Residues 152 % Identity 13% Template c1xrsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit; PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	I	E	S	H	L	M	G	A	F	N	V	S	N	L	L	L	A	L	A	T	L	L	A	L	G	Y	P	L	A	D	L	L	K	T	A	A	R	L	Q	P	V	C	G	R	M	E	V	F	T	A	P	G	K	P	T	V	V	V	D	Y	A	H	T	P	D	A	L	E	K	A	L	Q	A	A	R	L	H
Query Conservation
Alig confidence																		.	.																			.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																		.	.																			.	.	.	.	.	.	.	.	.	.	.					.	.
Template Sequence		Q	L	S	F	T	L	P	L	K	N	N	E	R	S	A	E	.	.	A	A	K	Q	I	A	L	K	M	G	L	E	E	P	S	V	V	M	.	.	.	.	.	.	.	.	.	.	.	Q	Q	S	L	.	.	D	E	E	F	T	F	F	V	V	Y	G	N	E	I	L	S	M	E	E	T	D	E	Y	I	K	E	N
Template Known Secondary structure								S	S		S	S						.	.								T	T	S	S								.	.	.	.	.	.	.	.	.	.	.					.	.		T	T
Template Predicted Secondary structure																		.	.																			.	.	.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.											.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		C	A	G	K	L	W	C	V	F	G	C	G	G	D	R	D	K	G	K	R	P	L	M	G	A	I	A	E	E	F	A	D	.	.	.	.	.	.	.	.	.	.	V	A	V	V	T	D	D	N	P	R	T	E	E	P	R	A	I	I	N	D	I	L	A	G	M	L	D	A	G	H	A	K	V	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.								.	.	.																								.	.	.	.	.
Template Conservation																																																			.	.	.
Template Sequence		I	G	R	K	I	V	V	V	G	A	S	T	G	T	D	A	H	T	V	G	I	D	A	I	M	N	M	K	G	Y	A	G	H	Y	G	L	E	R	Y	E	M	I	D	A	Y	N	L	G	S	.	.	.	Q	V	A	N	E	D	F	I	K	K	A	V	E	L	E	A	D	V	L	L	V	S	Q	T	V	T	Q	K
Template Known Secondary structure		T		S									B	T	T												S	T	T		B	T	T	B			G	G	G		T	T								S	.	.	.	S	B												T	T		S										T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
					441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	M	E	G	R	A	E	A	V	T	C	A	V	M	Q	A	K	E	N	D	V	V	L	V	A	G
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		N	V	H	I	Q	N	M	T	H	L	I	E	L	L	E	A	E	G	L	R	D	R	F	V	L	L	C	G
Template Known Secondary structure		S																T	T		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions