Job Description P22188 Confidence 94.21% Date Thu Jan 5 11:38:45 GMT 2012 Rank 58 Aligned Residues 84 % Identity 19% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.														.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	H	E	P	S	D	N	L	R	L	V	G	V	T	G	T	N	.	.	G	K	T	T	T	T	Q	L	L	A	Q	W	S	Q	L	L	G	E	I	S	A	V	M	G	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	G	L	L	G	K	V	I	P	T	E	N	T	T	G	S	A	V	D	V	Q
Query Conservation																			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	N	P	T	K	L	P	F	I	I	M	L	V	G	V	Q	G	S	G	K	T	T	T	A	G	K	L	A	Y	F	Y	K	K	R	G	Y	K	V	G	L	V	A	A	D	V	Y	R	P	A	A	Y	D	Q	L	L	Q	L	G	N	Q	I	G	V	Q	V	Y	G	E	P	N	N	Q	N	P	I	E	I	A	K
Template Known Secondary structure				S		S	S	S	S								S	S	S	S	S	S	T	T	T										T	T	S					B						S	S	S		S											T	T							S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	L	A	G	L	V	D	Q	G	A	T	F	C	A	M	E	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	V	D	I	F	V	K	N	K	M	D	I	I	I	V	D	T	A
Template Known Secondary structure										T	T		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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