Return to main results Retrieve Phyre Job Id

Job DescriptionP22188
Confidence30.29%DateThu Jan 5 11:38:45 GMT 2012
Rank364Aligned Residues72
% Identity11%Templatec1o57A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   312.......320.........330..... ....340..... ....350.........360.........370.........
Predicted Secondary structure 



.....






.......











Query SS confidence 























. . . . .









. . . . . . .

































Query Sequence  LLLALATLLALGYPLADLLKTAAR. . . . . LQPVCGRMEV. . . . . . . FTAPGKPTVVVDYAHTPDALEKALQAARLHCAGK
Query Conservation 





 
  


    
   
  .....     

 
 .......        

 





 
  
 
  
      
Alig confidence 























.....









.......





























.


Template Conservation 



  

  

 


 


          
          
    
  
 








 

 

 
 
 

 

.

 
Template Sequence  IPLAYAAASYLNVPVVIVRKDGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEF. NAN
Template Known Secondary structure  T

B




SS

SGGGS
TT
SSSTGGG.T
Template Predicted Secondary structure 






















.

Template SS confidence 















































































   142.......150.........160.........170.........180.........190.........200.........210....... ..220
 
   380....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  LWCVF
Query Conservation   
 
 
Alig confidence 




Template Conservation 



 
Template Sequence  VAGIG
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   226...230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions