Return to main results Retrieve Phyre Job Id

Job DescriptionP22188
Confidence39.10%DateThu Jan 5 11:38:45 GMT 2012
Rank310Aligned Residues104
% Identity13%Templatec1eucB_
PDB info PDB header:ligaseChain: B: PDB Molecule:succinyl-coa synthetase, beta chain; PDBTitle: crystal structure of dephosphorylated pig heart, gtp-2 specific succinyl-coa synthetase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   349350....... ..360.........370.........380.........390.........400.........410.........420......
Predicted Secondary structure 


..



























Query SS confidence 








. .




































































Query Sequence  PGKPTVVVD. . YAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIIN
Query Conservation       

 
..




 
  
 
  
      
 
 
 
  
 
                
 



      
    
  
Alig confidence 








..























































.











Template Conservation 

 








 
  
    

 


 
  
  




 


    

  

 
        



.

 
        
Template Sequence  GGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNAIIANGITKACRELELKVPLVV. RLEGTNVHEAQN
Template Known Secondary structure  T

BS

SS

TTS
TT


SS


T

S
.STT
Template Predicted Secondary structure 




























.



Template SS confidence 















































































   287..290.........300.........310.........320.........330.........340.........350... ......360.....
 
   427..430.........440.........450......
Predicted Secondary structure 










Query SS confidence 





























Query Sequence  DILAGMLDAGHAKVMEGRAEAVTCAVMQAK
Query Conservation   
              
   

  
   
 
Alig confidence 







...


















Template Conservation   
   


...     
   

  

    
Template Sequence  ILTNSGLP. . . ITSAVDLEDAAKKAVASVT
Template Known Secondary structure  TT
SS...
SST

Template Predicted Secondary structure 



...



Template SS confidence 





























   367..370.... .....380.........390...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions