Job Description P37652 Confidence 21.30% Date Thu Jan 5 11:56:24 GMT 2012 Rank 54 Aligned Residues 71 % Identity 13% Template c3oggA_ PDB info PDB header:toxin Chain: A: PDB Molecule:botulinum neurotoxin type d; PDBTitle: crystal structure of the receptor binding domain of botulinum2 neurotoxin d Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.																.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	Y	L	M	R	S	T	G	I	D	M	D	I	N	Y	R	Y	T	M	P	P	V	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	R	M	D	I	S	L	N	N	Q	F	L	Q	S	F	N	L	S	S	K	Q	E	A	N	R	L	L	L	R	I	P	V	L	Q	G	L	L	D	G
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	W	I	L	Q	D	V	N	R	K	Y	K	S	L	I	F	D	Y	S	E	S	L	S	H	T	G	Y	T	N	K	W	F	F	V	T	I	T	N	N	I	M	G	Y	M	K	L	Y	I	N	G	E	L	K	Q	S	Q	K	I	E	D	L	D	E	V	K	L	D	K	T	I	V	F	G	I	D	E	N	I	D	E
Template Known Secondary structure								T	T											S	T	T	T		T	T	S		T	T											T	T	S							T	T									T	T	S				B								S			S				T
Template Predicted Secondary structure
Template SS confidence
		972	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.
		466	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	D	V	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	M	L	W	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		1052	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions