Return to main results Retrieve Phyre Job Id

Job DescriptionP37652
Confidence35.39%DateThu Jan 5 11:56:24 GMT 2012
Rank44Aligned Residues45
% Identity13%Templatec3hfxA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter; PDBTitle: crystal structure of carnitine transporter
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   732.......740.........750.........760.........770.........
Predicted Secondary structure 






Query SS confidence 















































Query Sequence  WFERVWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE
Query Conservation          

  
    

      


      

   



     
Alig confidence 



























..













.


Template Conservation          
   


 
         
 ..
 



  
 



.
  
Template Sequence  VINAVFSYVTNVWGWAFEWYMVVMLFGW. . FWLVFGPYAKKRLG. NEP
Template Known Secondary structure  ..SSSTTS
SS.SS
Template Predicted Secondary structure 

..








.


Template SS confidence 















































   3940.........50.........60...... ...70.........80 ...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions