Job Description P37652 Confidence 24.98% Date Thu Jan 5 11:56:24 GMT 2012 Rank 50 Aligned Residues 117 % Identity 13% Template c3fwlA_ PDB info PDB header:transferase, hydrolase Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: crystal structure of the full-length transglycosylase pbp1b2 from escherichia coli Resolution 3.09 Å

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		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	K	P	Y	D	A	P	N	W	V	R	T	D	R	P	V	T	F	G	E	L	K	T	Y	E	E	Q	L	Q	S	S	G	L	E	P	A	A	I	N	V	S	L	N	L	P	P	D	L	Y	L	M	R	S	T	G	I	D	M	D	I	N	Y	R	Y	T	M	P	P	V	K	D	S	S	R	M	D	I	S	L
Query Conservation
Alig confidence																									.	.	.											.	.	.	.
Template Conservation																									.	.	.											.	.	.	.
Template Sequence		P	A	A	V	Y	G	R	X	V	N	L	E	P	D	X	T	I	S	K	N	E	X	V	.	.	.	K	L	L	E	A	T	Q	Y	R	Q	.	.	.	.	V	S	K	X	T	R	P	G	E	F	T	V	Q	A	N	S	I	E	X	I	R	R	P	F	D	F	P	D	S	K	E	G	Q	V	R	A	R	L	T	F
Template Known Secondary structure														T	T										.	.	.						T	T				.	.	.	.		S	S			S	T	T						S	S												S	S	S
Template Predicted Secondary structure																									.	.	.											.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.				.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		N	N	Q	F	L	Q	S	F	N	L	S	S	K	Q	E	A	N	R	L	L	L	R	I	P	V	L	Q	G	L	L	D	.	.	.	G	K	T	D	V	S	I	P	A	L	K	L	G
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.
Template Conservation
Template Sequence		D	G	D	H	L	A	T	I	V	N	X	E	N	N	R	Q	F	G	F	F	R	L	D	P	R	L	I	T	X	I	S	S	P	N	G	E	Q	R	L	F	V	P	R	S	G	F	P
Template Known Secondary structure			T	T								T	T	T	T				S	S														T	T	S								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions