Job Description P37652 Confidence 6.60% Date Thu Jan 5 11:56:24 GMT 2012 Rank 96 Aligned Residues 82 % Identity 11% Template c2z64C_ PDB info PDB header:immune system Chain: C: PDB Molecule:lymphocyte antigen 96; PDBTitle: crystal structure of mouse tlr4 and mouse md-2 complex Resolution 2.84 Å

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.
Predicted Secondary structure																																																												.																	.
Query SS confidence																																																												.																	.
Query Sequence		L	M	R	S	T	G	I	D	M	D	I	N	Y	R	Y	T	M	P	P	V	K	D	S	S	R	M	D	I	S	L	N	N	Q	F	L	Q	S	F	N	L	S	S	K	Q	E	A	N	R	L	L	L	R	I	P	V	L	Q	G	.	L	L	D	G	K	T	D	V	S	I	P	A	L	K	L	G	.	A	T	N	Q
Query Conservation																																																												.																	.
Alig confidence																																																												.																	.
Template Conservation
Template Sequence		R	L	R	G	T	N	G	F	V	H	V	E	F	I	P	R	G	N	L	K	Y	L	Y	F	N	L	F	I	S	V	N	S	I	E	L	P	K	R	K	E	V	L	C	H	G	H	D	D	D	Y	S	F	C	R	A	L	K	G	E	T	V	N	T	S	I	P	F	S	F	E	G	I	L	F	P	K	G	H	Y	R
Template Known Secondary structure			S	S													S	S			T	T										T	T													S	S	S		S	S	G	G	G	G			T	T															S	S			S
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		482	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	V	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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