Job Description P37652 Confidence 44.56% Date Thu Jan 5 11:56:24 GMT 2012 Rank 38 Aligned Residues 45 % Identity 11% Template c2vqiA_ PDB info PDB header:transport Chain: A: PDB Molecule:outer membrane usher protein papc; PDBTitle: structure of the p pilus usher (papc) translocation pore Resolution 3.2 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		L	L	P	V	Q	S	Q	L	K	V	Y	L	N	D	E	L	M	G	V	L	P	V	T	K	E	Q	L	G	K	K	T	L	A	Q	M	.	P	I	N	P	L	F	I	S	D	F	N	R	V	R	L	E	F	V	G
Query Conservation																																					.
Alig confidence																										.	.	.	.	.	.						.				.	.	.
Template Conservation																										.	.	.	.	.	.										.	.	.
Template Sequence		I	A	E	T	N	A	R	V	V	V	S	Q	Q	G	R	V	L	Y	D	S	X	V	P	A	.	.	.	.	.	.	G	P	F	S	I	Q	D	L	D	.	.	.	S	S	V	R	G	R	L	D	V	E	V	I	E
Template Known Secondary structure				S	S	S								T	T										S	.	.	.	.	.	.										.	.	.	T	T			S
Template Predicted Secondary structure																										.	.	.	.	.	.										.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions