Job Description P37652 Confidence 18.59% Date Thu Jan 5 11:56:24 GMT 2012 Rank 59 Aligned Residues 105 % Identity 10% Template c2cdpC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:beta-agarase 1; PDBTitle: structure of a cbm6 in complex with neoagarohexaose Resolution 1.59 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		P	G	S	M	V	L	R	G	I	N	P	N	G	S	I	E	F	G	M	R	S	D	E	V	V	T	K	A	M	L	N	L	E	Y	T	P	S	P	S	L	L	P	V	Q	S	Q	L	K	V	Y	L	N	D	E	L	.	M	G	V	L	P	V	T	K	E	Q	L	G	K	K	T	L	A	Q	M	P	I	N	P	L
Query Conservation																																																									.
Alig confidence																					.	.	.																																		.
Template Conservation																					.	.	.
Template Sequence		N	G	N	T	A	I	N	Y	V	N	Q	G	D	Y	A	D	Y	T	I	.	.	.	A	V	A	Q	A	G	N	Y	T	I	S	Y	Q	A	G	S	G	V	T	G	G	S	I	E	F	L	V	N	E	N	G	S	W	A	S	K	T	V	T	A	V	P	N	Q	G	W	D	N	F	Q	P	L	N	G	G	S	V	Y
Template Known Secondary structure		T	T								B	T	T								.	.	.			S	S												B	S	S	S	S										T	T												B	S		T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	S	D	F	N	R	V	R	L	E	F	V	G	H	Y	Q	D	V	C	E	K	P	A	S	T	T	L	W	L	D	V	G	R
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		L	S	A	G	T	H	Q	V	R	L	H	G	A	G	S	N	N	W	Q	W	N	L	D	.	.	.	.	.	K	F	T	L	S	N
Template Known Secondary structure				S											S	S	S	S	B						.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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