Job Description P37652 Confidence 37.08% Date Thu Jan 5 11:56:24 GMT 2012 Rank 43 Aligned Residues 66 % Identity 15% Template c2bgpA_ PDB info PDB header:carbohydrate binding protein Chain: A: PDB Molecule:endo-b1,4-mannanase 5c; PDBTitle: mannan binding module from man5c in bound conformation Resolution UNK

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		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	S	L	N	L	P	P	D	L	Y	L	M	R	S	T	G	I	D	M	D	I	N	Y	R	Y	T	M	P	P	V	K	D	S	S	R	M	D	I	S	L	N	N	Q	F	L	Q	S	F	N	L	S	S	K	Q	E	A	N	R	L	L	L	R	I	P	V	L	Q	G	L	L	D	G	K	T	D	V	S	I
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.															.	.																.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.															.	.																.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	W	N	V	D	V	P	.	.	.	.	.	.	.	.	V	T	G	E	Y	R	I	N	L	T	W	S	S	P	.	.	Y	S	S	K	V	N	T	L	V	M	D	G	T	A	L	.	S	Y	A	F	A	E	A	T	V	P	V	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	T	K	T	L
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	S	S												S	.	.	S										T	T				.								S	S					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.															.	.																.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.														.	.	90	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	K	L	G	A	T	N	Q	L	R	F	D
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		S	A	.	.	.	.	G	N	H	S	F	G	V	R
Template Known Secondary structure			S	.	.	.	.
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		94	.					.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions