 |
Job Description | P37652 | Confidence | 11.24% | Date | Thu Jan 5 11:56:24 GMT 2012 |
Rank | 73 | Aligned Residues | 72 |
% Identity | 21% | Template | c1xc6A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:beta-galactosidase; |
PDBTitle: native structure of beta-galactosidase from penicillium sp. in complex2 with galactose
|
Resolution | 2.10 Å |
|
 |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
. | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
| . |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | S | I | E | F | G | M | R | S | D | E | V | V | T | K | A | M | L | N | L | E | Y | T | P | S | P | S | L | L | P | V | Q | S | Q | L | K | V | Y | L | N | D | E | L | M | G | V | L | P | V | T | K | E | Q | L | G | K | K | T | L | A | Q | M | P | I | N | P | L | F | I | . |
S | D | F | N | R | V | R | L | E |
Query Conservation |   |
  |   |   |
|   |
|   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|   |   |
|
|   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   | . |   |
|   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|
|
|   |
|   | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |
|
|
|   | . | . | . |   |   |
|
|
|
|   |   |
|   |
|
| . |   |
|
|
|   |   |   |
|   |
|   |
|
|   |
|
Template Sequence |   |
S | T | S | F | D | L | D | L | P | S | G | Y | . |
. |
. |
D | I | P | L | Y | F | N | F | G | N | S | T | S | T | . |
P | A | A | Y | R | V | Q | L | Y | V | N | G | Y | Q | Y | G | K | Y | V | . |
. |
. |
N | N | I | G | P | Q | T | S | F | P | V | P | . |
E | G | I | L | N | Y | H | G | T | N | W | L | A | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
| T | T |  | . | . | . |  |
|
|  |  |  |  |  |
|
|
|
| S | S | . |
|
|
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | . | . | . | T | T | T |
| S |
|
|  |  |  |  |
| . | B | T | T | B |
| T | T | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
896 | . | . | . | 900 | . | . | . | . | . | . | . | |
|
|
. | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | |
. | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | |
|
|
. | . | . | . | . | . | . | . | . | 950 | . | . | |
. | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . |
  |
  |   |
174 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
F |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
L |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
968 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|