Job Description P37652 Confidence 87.12% Date Thu Jan 5 11:56:24 GMT 2012 Rank 16 Aligned Residues 88 % Identity 15% Template c1nkgA_ PDB info PDB header:lyase Chain: A: PDB Molecule:rhamnogalacturonase b; PDBTitle: rhamnogalacturonan lyase from aspergillus aculeatus Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.											150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	G	I	N	P	N	G	S	I	E	F	G	M	R	S	D	E	V	V	T	K	A	M	L	N	L	E	Y	T	P	S	P	S	L	L	P	V	Q	S	Q	L	K	V	Y	L	N	D	E	L	M	G	V	L	P	V	T	K	E	Q	L	.	.	.	.	.	.	.	.	.	.	G	K	K	T	L	A	Q	M	P
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																					.													.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																					.													.	.	.	.
Template Sequence		F	K	S	V	N	N	P	V	T	I	K	F	T	A	T	S	A	Q	T	.	G	A	A	T	L	R	I	G	T	T	L	S	.	.	.	.	F	A	G	G	R	P	Q	A	T	I	N	S	Y	T	G	S	A	P	A	A	P	T	N	L	D	S	R	G	V	T	R	G	A	Y	R	G	L	G	E	V	Y	D	V	S
Template Known Secondary structure			T	T	T	T											G	G	G		.	S												.	.	.	.		T	T								T	T														S			G	G	G	T				S
Template Predicted Secondary structure																					.													.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.					.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		159	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		I	N	P	.	L	F	I	S	D	F	N	R	V	R	L	E	F	V	G	H	Y	Q	D	V
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		I	P	S	G	T	I	V	A	G	T	N	T	I	T	I	N	V	I	S	G	S	S	G	D
Template Known Secondary structure				T	T	S	S		S												S				S
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions