Job Description P0A982 Confidence 16.54% Date Thu Jan 5 11:09:34 GMT 2012 Rank 84 Aligned Residues 64 % Identity 14% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		R	K	M	T	G	I	V	K	T	F	D	R	K	S	G	K	G	F	I	I	P	S	D	G	R	K	E	V	Q	V	H	I	S	A	F	T	P	R	D	A	E	V	L	.	.	.	.	.	I	P	G	L	R	V	E	F	C	R	V	N	G	L	R	G	P	T	A	A	N	V	Y	L
Query Conservation																																													.	.	.	.	.
Alig confidence													.	.	.																														.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		S	I	I	P	V	R	V	E	R	F	W	.	.	.	H	N	D	I	I	C	T	T	N	S	E	V	E	C	V	V	N	A	Q	R	H	A	G	A	Q	L	R	R	P	A	N	E	I	Y	E	I	G	K	T	Y	P	A	K	V	I	Y	I	D	Y	A	N	I	T	A	E	V	S	L
Template Known Secondary structure													.	.	.	S	S							T	T	S							T	T	S	S	S	S	T	T	S		S		S	T	T	T	S		T	T												G	G	G	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		1136	.	.	.	1140	.	.	.	.	.	.				.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions