Return to main results Retrieve Phyre Job Id

Job DescriptionP0A982
Confidence99.87%DateThu Jan 5 11:09:34 GMT 2012
Rank6Aligned Residues65
% Identity35%Templatec3a0jB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:cold shock protein; PDBTitle: crystal structure of cold shock protein 1 from thermus2 thermophilus hb8
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50......... 60.........
Predicted Secondary structure 
























..


Query SS confidence 























































. .









Query Sequence  KMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGL. . RGPTAANVYL
Query Conservation     
 

 
   





  

   


 
 
 
       
  
  
 
      ..

  
  
 
Alig confidence 



















.


































..









Template Conservation 
  
 

 
   





  .
 
 


 
 
 
       
  
  
 
        

  
  
  
Template Sequence  MQKGRVKWFNAEKGYGFIER. EGDTDVFVHYTAINAKGFRTLNEGDIVTFDVEPGRNGKGPQAVNVTV
Template Known Secondary structure 
TTTT
.TTS

GGGB

SS
S


TT



TT


Template Predicted Secondary structure 







.
























Template SS confidence 



































































   1........10.........20 .........30.........40.........50.........60.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions