 |
Job Description | P0A982 | Confidence | 16.24% | Date | Thu Jan 5 11:09:34 GMT 2012 |
Rank | 86 | Aligned Residues | 39 |
% Identity | 13% | Template | c2pkuA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:prkca-binding protein; |
PDBTitle: solution structure of pick1 pdz in complex with the2 carboxyl tail peptide of glur2
|
Resolution | UNK |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
. | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | K | S | G | K | G | F | I | I | P | S | D | G | R | K | E | V | Q | V | H | I | S | A | F | T | P | R | D | A | E | . |
. |
. |
. |
V | L | I | P | G | L | R | V |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   | . | . | . | . |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
Template Sequence |   |
D | A | Q | N | L | I | G | I | S | I | G | G | G | A | Q | Y | C | P | C | L | Y | I | V | Q | V | F | D | N | T | P | A | A | L | D | G | T | V | A | A | G | D | E | I |
Template Known Secondary structure |   |
| T | T | S |
|
|
|  |  |  |  |
|
| S | S | S |
|
|
|
|  |  |  |  |  |
| T | T |
|  |  |  |  |  | T | S | S |
| T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|