Job Description P0A982 Confidence 16.49% Date Thu Jan 5 11:09:34 GMT 2012 Rank 85 Aligned Residues 51 % Identity 25% Template c1go3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: structure of an archeal homolog of the eukaryotic rna2 polymerase ii rpb4/rpb7 complex Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.														.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	M	T	G	I	V	K	T	F	D	R	K	S	G	K	G	F	I	I	P	S	D	G	R	K	E	V	Q	V	H	I	S	A	F	T	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	V	L	I	P	G	L	R	V	E	F	C	R	V	N
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.				.					.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.				.					.	.
Template Sequence		E	L	I	E	G	E	V	V	D	V	V	E	.	F	G	S	.	F	V	R	L	.	.	G	P	L	D	G	L	I	H	V	S	Q	I	M	D	D	Y	V	S	Y	D	P	K	A	I	I	G	K	E	T	G	K	V	L	E	I	G	D	Y	V	R	A	R	I	V	A
Template Known Secondary structure													T	.	T			.					.	.	S	S	S						G	G	G	S		S	S												T	T	T						T	T
Template Predicted Secondary structure														.				.					.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.		.	.	.		.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions