 |
Job Description | P33602 | Confidence | 97.25% | Date | Thu Jan 5 11:52:24 GMT 2012 |
Rank | 122 | Aligned Residues | 64 |
% Identity | 22% | Template | d1vlfn2 |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Ferredoxin domains from multidomain proteins
|
Resolution | 2.00 |
|
 |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 180 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
I | S | H | E | M | N | R | C | I | A | C | Y | R | C | V | R | Y | Y | K | D | Y | A | D | G | T | D | L | G | V | Y | G | A | H | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | V | Y | F |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |
Template Sequence |   |
M | V | I | D | V | A | K | C | Q | D | C | N | N | C | F | M | G | C | M | D | E | H | E | L | N | E | W | P | G | Y | T | A | S | M | Q | R | G | H | R | W | M | N | I | E | R | R | E | R | G | T | Y | P | R | N | D | I | N | Y | R | P | T | P | C | M | H | C | E | N | A | P | C | V | A | K | G | N | G | A | V | Y |
Template Known Secondary structure |   |
 |  |  |  | G | G | G |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | S |
|
| B | T | T | T | B |
|
|
|
| T | T |
|
| S | S |  |  |  |  |  |  |  | S |
| T | T | S |
|  |  |  |  |  |  |  |
|
|
|
|
| T | T |
|  |  |  |  | T | T | T | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
182 | . | . | . | . | . | . | . | |
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | P | E | D | G | T | L | . |
. |
. |
. |
E | S | E | F | S | G | N | L | V | E | I | C | P | T | G | V | F | T |
Query Conservation |   |
  |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |
|
|   |   |   |
|
|
|
|
|   |
|   |   |
|
|
|   |   |
|
|   |
Template Sequence |   |
Q | R | E | D | G | I | V | L | I | D | P | E | K | A | K | G | K | K | E | L | L | D | T | C | P | Y | G | V | M | Y |
Template Known Secondary structure |   |
 |
| T | T | S |
|  |  |  |
| T | T | T | T | T | T |
| G | G | G | G | G | G |
| S | S |
|
|
|  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|