 |
Job Description | P33602 | Confidence | 99.60% | Date | Thu Jan 5 11:52:24 GMT 2012 |
Rank | 47 | Aligned Residues | 96 |
% Identity | 19% | Template | d1vlfm1 |
SCOP info | Double psi beta-barrel
| ADC-like
| Formate dehydrogenase/DMSO reductase, C-terminal domain
|
Resolution | 2.00 |
|
 |
  |   |
807 | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | K | W | R | I | A | P | Y | Y | H | L | F | G | S | D | E | L | S | Q | R | A | P | V | F | Q | S | R | M | P | Q | P | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | K | L | N | P | A | D | A | A | K | L | G | V | N | A | G | T | R | V | S | F | S | Y | D | G | N | T | V | T | L | P | V | E | I | A | E | G |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |
|
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |
|   |   |
|   |
|   |   |   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
Template Sequence |   |
K | Y | P | L | G | M | L | S | P | H | P | R | F | S | M | H | T | M | G | D | G | K | N | S | Y | M | N | Y | I | K | D | H | R | V | E | V | D | G | Y | K | Y | W | I | M | R | V | N | S | I | D | A | E | A | R | G | I | K | N | G | D | L | I | R | A | Y | N | D | R | G | S | V | I | L | A | A | Q | V | T | E | C |
Template Known Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
| T | T | S | B | T | T | B | S | S | S | T | T |
| G | G | G | G | S | T | T | T |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
729 | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . |
  |
  |   |
877 | . | . | 880 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
890 | . | . | . | . | . | . | . | . | . | 900 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | A | G | Q | V | G | L | P | M | G | M | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | A | P | V | L | A | G | A | H | L | E | D |
Query Conservation |   |
|   |
|
|
|
|   |
|
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |
|
Template Sequence |   |
L | Q | P | G | T | V | H | S | Y | E | S | C | A | V | Y | D | P | L | G | T | A | G | K | S | A | D | R | G | G | C | I | N | I | L | T | P | D | R | Y | I | S |
Template Known Secondary structure |   |
S |
| T | T |  |  |  |
|
| S |
|
|
|
|
|
| B | S | S | S | T | T | T | S |
| B | S | S |
|
| G | G | G | S | S |
|
| S |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
809 | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|