 |
Job Description | P33602 | Confidence | 82.25% | Date | Thu Jan 5 11:52:24 GMT 2012 |
Rank | 199 | Aligned Residues | 138 |
% Identity | 11% | Template | d1t9ba1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 2.20 |
|
 |
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | |
|
. | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | |
|
|
. | 370 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . | . | . |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
Q | G | A | A | D | I | L | R | Q | S | K | K | V | I | G | I | G | S | P | R | A | . |
. |
S | V | E | S | N | F | A | L | R | E | L | V | G | E | E | N | F | Y | T | G | I | A | H | G | E | Q | E | R | L | Q | L | A | L | K | V | L | R | E | G | G | I | Y | T | P | A | L | R | E | . |
. |
. |
I | E | S | Y | D | A |
Query Conservation |   |
  |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   | . | . |
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
Template Sequence |   |
N | K | A | A | D | L | I | N | L | A | K | K | P | V | L | Y | V | G | A | G | I | L | N | H | A | D | G | P | R | L | L | K | E | L | S | D | R | A | Q | I | P | V | T | T | T | L | Q | G | L | G | S | F | D | Q | E | D | P | K | S | L | D | M | L | G | M | H | G | C | A | T | A | N | L | A | V | Q | N | A | D | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T |
| S | S |  |  |  |  |  |
| G | G | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
| G | G | G | T | T | S | S |
| T | T | S | T | T |  |  |  |  |
| S | T | T | S |
|  |  |  |  |  |  |  |  |  |
| S |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . |
  |
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | V | L | G | E | D | V | T | Q | T | G | A | R | V | A | L | . |
. |
. |
. |
. |
A | V | R | Q | A | V | K | G | K | A | R | E | M | A | A | A | Q | K | V | A | D | W | Q | I | A | A | I | L | N | I | G | Q | R | A | K | H | P | L | F | V | T | N | V | D | D | T |
Query Conservation |   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   | . | . | . | . | . |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
I | I | A | V | G | A | R | F | D | D | R | V | T | G | N | I | S | K | F | A | P | E | A | R | R | A | A | A | E | G | R | G | G | I | I | H | F | E | V | S | P | K | N | I | N | K | V | V | Q | T | Q | I | A | V | E | G | D | A | T | T | N | L | G | K | M | M | S | K |
Template Known Secondary structure |   |
 |  |  |  | S |
|
|
|
| T | T | T | S |
| S | G | G | G | S | S |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  | S |
| G | G | G | S | S | S | S | S |
|
| S |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|