Job Description P33602 Confidence 100.00% Date Thu Jan 5 11:52:24 GMT 2012 Rank 21 Aligned Residues 435 % Identity 16% Template d1ogya2 SCOP info Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Resolution 3.2

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		M	Q	F	A	P	S	I	C	Q	Q	C	S	I	G	C	N	I	S	P	G	E	R	Y	G	E	L	R	R	I	E	N	R	Y	N	G	T	V	N	H	Y	F	L	C	D	R	G	R	F	G	Y	G	Y	V	N	L	K	D	R	P	R	Q	P	V	Q	R	R	.	.	.	.	.	.	.	G	D	D	F	I	T	L
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	W	S	K	A	P	C	R	F	C	G	T	G	C	G	V	M	V	G	T	R	D	G	Q	V	V	A	T	H	G	D	T	Q	A	E	V	N	R	G	L	N	C	V	K	G	Y	F	L	S	K	I	M	Y	G	E	D	R	L	T	T	P	L	L	R	M	K	D	G	V	Y	H	K	E	G	E	F	A	P	V
Template Known Secondary structure										S	S		S	S										T	T									T	T		T	T	T	S	S								G	G	G	G	S	T	T		T	T				S				S		S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.				.	.	.	360	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																											.	.	.
Query SS confidence																							.	.	.	.	.	.																																											.	.	.
Query Sequence		N	A	E	Q	A	M	Q	G	A	A	D	I	L	R	Q	S	K	K	V	I	G	.	.	.	.	.	.	I	G	S	P	R	A	S	V	E	S	N	F	A	L	R	E	L	V	G	E	E	N	F	Y	T	G	I	A	H	G	E	Q	E	R	L	Q	L	A	L	K	V	L	.	.	.	R	E	G	G	I	Y	T	P
Query Conservation																							.	.	.	.	.	.																																											.	.	.
Alig confidence																							.	.	.	.	.	.																																											.	.	.
Template Conservation
Template Sequence		S	W	D	E	A	F	D	V	M	A	A	Q	A	K	L	V	L	K	E	K	A	P	E	A	V	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	M	R	A	G	F	R	S	N	N	L	D	P	N	A	R	H	C	M	A	S	A	A	T	A	F	M	R	T	F	G	M	D	E	P	M	G
Template Known Secondary structure																					T		G	G	G							T	T	S														T	T	S								T					T												S	S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																																											.	.	.
Query SS confidence																																			.	.																																											.	.	.
Query Sequence		A	L	R	E	I	E	S	Y	D	A	V	L	V	L	G	E	D	V	T	Q	T	G	A	R	V	A	L	A	V	R	Q	A	V	.	.	K	G	K	A	R	E	M	A	A	A	Q	K	V	A	D	W	Q	I	A	A	I	L	N	I	G	Q	R	A	K	H	P	L	F	V	T	N	V	D	D	T	R	L	.	.	.
Query Conservation																																			.	.																																											.	.	.
Alig confidence																																			.	.																																											.	.	.
Template Conservation
Template Sequence		C	Y	D	D	F	E	A	A	D	A	F	V	L	W	G	S	N	M	A	E	M	H	P	I	L	W	S	R	L	T	D	R	R	L	S	H	E	H	V	R	V	A	V	L	S	T	F	T	H	R	S	S	D	L	S	D	T	P	I	I	F	R	P	G	T	D	R	A	I	L	N	Y	I	A	H	H	I	I	S	T
Template Known Secondary structure			T	T						S						S							S														S	T	T								S	S			G	G	G	G	S		S							T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
				440	.	.	.	.	.	.	.	.	.	450																																	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	D	D	I	A	A	W	T	Y	R	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	D	Q	A	R	L	G	F	A	I	A	H	A	L	D	N	S	A	P	A	V	D	G	I	E	P	E	L	Q	S	K	I	D	V
Query Conservation		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	V	N	R	D	F	V	D	R	H	T	N	F	A	L	G	A	T	D	I	G	Y	G	L	R	P	E	H	Q	L	Q	L	A	A	K	G	A	A	D	A	G	A	M	T	P	T	D	F	E	T	F	A	A	L	V	S	E	Y	T	L	E	K	A	A	E	I	S	G	V	E	P	A	L	L	E	E	L	A	E
Template Known Secondary structure		T																		S	S			T	T			T	T	S					S		T	T		S	S		S				B												T	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.			.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																		.	.																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	Q	A	L	A	G	A	K	K	P	L	I	I	S	G	.	.	T	N	A	G	S	L	E	V	I	Q	A	A	A	N	V	A	K	A	L	K	G	R	G	A	D	V	.	G	I	T	M	I	A	R	S	V	N	S	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	A	D	P	D	R	K	W	M	S	L	W	T	M	G	F	N	Q	H	V	R	G	V	W	A	N	H	M	V	Y	N	L	H	L	L	T	G	K	I	S	E	P	G	N	S	P	F	S	L	T	G	Q	P	F	A	C	G	T	A	R	E	V	G	T	F	A	H	R	L	P	A	D	M	V	V	T	N	P	E
Template Known Secondary structure			T	T	S	T	T	S							S					S	S	T	T																T			S	B	T	T	B								S	T	T	T	T	T	T					T		S	T	T			T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
																	541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.		.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.			.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	I	M	G	G	G	S	L	E	E	A	L	T	E	L	E	T	G	R	A	D	A	V	V	V	L	E	.	N	D	L	H	R	H	A	S	A	I	R	V	N	A	A	L	.	.	A	K	A	P	L	V	M	V	V	D	H	Q	R	T	A	I	M	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.																	.	.
Template Conservation
Template Sequence		H	R	A	H	A	E	E	I	W	K	L	P	A	G	L	L	P	D	W	V	G	A	H	A	V	E	Q	D	R	K	L	H	D	G	E	I	N	F	Y	W	V	Q	V	N	N	N	M	Q	A	A	P	N	I	D	Q	E	T	Y	P	G	Y	R	N	P	E	N	F	I	V	V	S	D	A	Y	P	T	V	T	G	R
Template Known Secondary structure										T	T			T	T		S			S															T	S								S							S	T	T												T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	H	L	V	L	S	A	A	S	F	A	E	S	D	G	T	V	I	N	N	E	G	R	A	Q	R	F	F	Q	V	Y	D	P	A	Y	Y	D	S	K	T	V	M	L	E	S	W	R	W	L	H	S	L	H	S	T	L	L
Query Conservation
Alig confidence																																		.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		A	A	D	L	V	L	P	A	A	M	W	V	E	K	E	G	A	Y	G	N	A	E	R	R	T	H	F	W	H	Q	L	V	.	.	.	.	.	E	A	P	G	E	A	R	S	D	L	W	Q	L	M	E	F	S	K	R	F	T
Template Known Secondary structure		T	S	S					B			G	G	G	S							T	T	S							B		S	.	.	.	.	.			S	T	T		B											T	T
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.						.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.