 |
Job Description | P33602 | Confidence | 46.37% | Date | Thu Jan 5 11:52:24 GMT 2012 |
Rank | 239 | Aligned Residues | 117 |
% Identity | 19% | Template | c3hbaA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:putative phosphosugar isomerase; |
PDBTitle: crystal structure of a putative phosphosugar isomerase (sden_2705)2 from shewanella denitrificans os217 at 2.00 a resolution
|
Resolution | 2.00 Å |
|
 |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | |
|
. | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | A | M | Q | G | A | A | D | I | L | R | Q | S | K | K | . |
. |
V | I | G | I | G | S | P | R | A | S | V | E | S | N | F | A | L | R | E | L | V | G | E | E | N | F | Y | T | G | I | A | H | G | E | Q | E | R | L | Q | L | A | L | K | V | L | R | E | G | G | I | Y | T | P | A | L | R | E | I | E | S | Y | D |
Query Conservation |   |
|
|
|
|   |   |
|
|
|
|
|   |   |   |   |   | . | . |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | A | I | T | E | S | L | G | S | V | L | R | E | F | K | P | K | F | V | X | I | V | G | R | G | S | S | D | H | A | G | V | F | A | K | Y | L | F | E | I | E | A | S | I | P | T | F | A | A | A | P | S | V | A | S | V | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | T | L | K | L | A | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  | S | S | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  | T | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 90 | . |
  |
  |   |
374 | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | |
. | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | L | V | L | G | E | D | V | T | Q | T | G | A | R | V | A | L | A | V | R | Q | A | V | K | G | K | A | R | E | M | A | A | . |
A | Q | K | V | A | D | W | Q | I | A | A | I | L | N | I | G | Q | R | A | K | H | P |
Query Conservation |   |
  |
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
| . |
|
|
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   | . | . |
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
L | V | I | V | I | S | Q | . |
. |
S | G | R | S | P | D | I | L | A | Q | A | R | X | A | K | N | A | G | A | F | C | V | A | L | V | N | D | E | T | A | P | I | K | D | I | V | D | V | V | I | P | L | R | A | G | E | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | . | . | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
| T | T | S | G | G | G | G | T | S | S |  |  |  |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | |
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|