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Job DescriptionP33602
Confidence100.00%DateThu Jan 5 11:52:24 GMT 2012
Rank12Aligned Residues655
% Identity14%Templatec2ivfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220. ........ 230.........240.........250.........260.. .......270.........280..
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Query Sequence  RYNRKWDM. QFAPSICQ. . . QCSIGCNISPGERYGELRRIENRYNGTVNHYFL. . . . . . . CDRGRFGYGYVNLKDRPRQP
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Template Sequence  IYRKEWKWDKVNWGSHLNICWPQGSCKFYVYVRNGIVWREEQAAQTPACNVDYVDYNPLGCQKGSAFNNNLYGDERVKYP
Template Known Secondary structure  TTS

S


S

SS




TT





SSTTS



S


TTGGGTTSTTB

S
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   67..70.........80.........90.........100.........110.........120.........130.........140......
 
   283.... ..290.........300.........310.... .....320.........330.........340.........350.
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Query Sequence  VQRRG. . . . DDFITLNAEQAMQGAADILRQSKKVIG. . . . . . . IGSPRASVESNFALRELVGEENFYTGIAHGEQERLQL
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Template Sequence  LKRVGKRGEGKWKRVSWDEAAGDIADSIIDSFEAQGSDGFILDAPHVHAGSIAWGAGFRMTYLMDGVSPDINVDIGDTYM
Template Known Secondary structure 
SSTTS



GGGG



STT
T
B
T


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   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   352.......360.........370.........380.........390.........400.........410.........420.........430.
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Query Sequence  ALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFV
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Template Sequence  GAFHTFGKMHMGYSADNLLDAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPDFNPTTPAADLHVPVRVGSDAAF
Template Known Secondary structure  S



B

GGGGGG
SS


TTTT

SS

TTGGG
S


TT
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   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   432....... 440.........450.
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Query Sequence  TNVDDTRL. . . . . DDIAAWTYRAPV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  WLGLSQVMIDEKLFDRQFVCEQTDLPLLVRMDTGKFLSAEDVDGGEAKQFYFFDEKAGSVRKASRGTLKLDFMPALEGTF
Template Known Secondary structure  TT
S
BSTTSTTT
SB
BS

TT
TTTT
SS



SS



S
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   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   452.......460.........470.........480.........490.........500.........510........
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Query Sequence  . . . . . . . . . . . . . EDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAK
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Template Sequence  SARLKNGKTIQVRTVFEGLREHLKDYTPEKASAKCGVPVSLIRELGRKVAKKRTCSYIGFSSAKSYHGDLMERSLFLAMA
Template Known Secondary structure 
TTS
GGGGS


S

TTTTTBTT
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   387..390.........400.........410.........420.........430.........440.........450.........460......
 
   519520.........530.........540.
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Query Sequence  ALKGRGADVGITMIARSVNSMGL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation    
      
        
  
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Template Sequence  LSGNWGKPGTGAFAWAYSDDNMVYLGVMSKPTAQGGMDELHQMAEGFNKRTLEADPTSTDEMGNIEFMKVVTSAVGLVPP
Template Known Secondary structure  TT
SSSTT

S
B





SS
GGGTTT
TT

TT
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   467..470.........480.........490.........500.........510.........520.........530.........540......
 
   542.......550.........560........ .570.........580 ....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIMGGGSLEEALTELETGRADAVVVLE. NDLHRHASAIRV. . NAAL
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Template Conservation                                        
              

       

  
            
Template Sequence  AMWLYYHVGYDQLWNNKAWTDPALKKSFGAYLDEAKEKGWWTNDHIRPAPDKTPQVYMLLSQNPMRRKRSGAKMFPDVLF
Template Known Secondary structure  SSTT
GGGS
TTSSS
TTSS
TTTS
S
TTS


S

STTTTG
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   547..550.........560.........570.........580.........590.........600.........610.........620......
 
   585....590.........600.........610.........620.... .....630.........640.........650.........660
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Query Sequence  AKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE. . GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLL. .
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Template Sequence  PKLKMIFALETRMSSSAMYADIVLPCAWYYEKHEMTTPCSGNPFFTFVDRSV. . . . . APPGECREEWDAIALILKKVGER
Template Known Secondary structure  GG
SSB

TTGGG
SB

TT



SSS

S.....

STT
B
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   627..630.........640.........650.........660.........670........ .680.........690.........700.
 
   661........670.........680.........690.........700.........710.........720.........730
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Query Sequence  . . . . . . . . . . SREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDI
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Template Conservation                                  .....                          
                
Template Sequence  AAARGLTEFNDHNGRKRRYDELYKKFTMDGHL. . . . . LTNEDCLKEMVDINRAVGVFAKDYTYEKFKKEGQTRFLSMGTG
Template Known Secondary structure  TT


TTS
GGGTTTTT
.....
STTSS
TT




S
TTS
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   702.......710.........720.........730... ......740.........750.........760.........770......
 
   731........740.........750.........760.........770.........780.........790.........800.........810
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Query Sequence  DTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTSVPARFQPQDGKW
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Template Sequence  VSRYAHANEVDVTKPIYPMRWHFDDKKVFPTHTRRAQFYLDHDWYLEAGES. . . . . . . . . . . . . LPTHKDTPMVGGDHPF
Template Known Secondary structure  T
S


TTS


S
S



SSTTSSB





T
S.............S







TTSS
S
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   777..780.........790.........800.........810.........820....... ..830.........840...
 
   811........820...... ...830.........840.........850.........860.........870.........880.........
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Query Sequence  RIAPYYHLFGSDELSQ. RAPVFQSRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMS
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Template Sequence  KITGGHPRVSIHSTHLTNSHLSRLHRGQPVVHMNSKDAAELGIKDGDMAKLFNDFADCEIMVRTAPNVQPKQCIVYFWDA
Template Known Secondary structure 



SSSSTTTTTT
TTS
SS
TT

TT

SS
TTS
TT




G
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   844.....850.........860.........870.........880.........890.........900.........910.........920...
 
   890.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  GI
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  HQ
Template Known Secondary structure  GG
Template Predicted Secondary structure 

Template SS confidence 

   924.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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