Job Description P33602 Confidence 100.00% Date Thu Jan 5 11:52:24 GMT 2012 Rank 28 Aligned Residues 205 % Identity 19% Template c1c4cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		M	A	T	I	H	V	D	G	K	E	Y	E	V	N	G	A	D	N	L	L	E	A	C	L	S	L	G	L	D	I	P	Y	F	C	W	H	P	A	L	G	.	S	V	G	A	C	R	Q	C	A	V	K	Q	Y	Q	N	A	E	D	T	R	G	R	L	V	M	S	C	M	T	P	A	S	D	G	T	F	I	S	I
Query Conservation																																										.
Alig confidence																																										.																	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		M	K	T	I	I	I	N	G	V	Q	F	N	T	D	E	D	T	T	I	L	K	F	A	R	D	N	N	I	D	I	S	A	L	C	F	L	N	N	C	N	N	D	I	N	K	C	E	I	C	T	V	E	V	E	G	T	G	.	.	.	.	.	.	L	V	T	A	C	D	T	L	I	E	D	G	M	I	I	N	T
Template Known Secondary structure								T	T										B								T	S						S	S		B	T	T	B			S	S	S				T	T					T	T	T		.	.	.	.	.	.				T	T	S		B			T	T					S
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		D	D	E	E	A	K	Q	F	R	E	S	V	V	E	W	L	M	T	N	H	P	H	D	C	P	V	C	E	E	G	G	N	C	H	L	Q	D	M	T	V	M	T	G	H	S	F	R	R	Y	R	F	T	K	.	R	T	H	R	N	Q	D	L	G	P	F	I	S	H	E	M	N	R	C	I	A	C	Y	R	C	V
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		N	S	D	A	V	N	E	K	I	K	S	R	I	S	Q	L	L	D	I	H	E	F	K	C	G	P	C	N	R	R	E	N	C	E	F	L	K	L	V	I	K	Y	K	A	R	A	S	K	P	F	L	P	K	D	K	T	E	Y	V	D	E	R	S	K	S	L	T	V	D	R	T	K	C	L	L	C	G	R	C	V
Template Known Secondary structure		S		S															T	T					T	T	T		T	T	G	G	G		S	S	S							T				S	S					S			G	G	G					S	S	S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		R	Y	Y	K	D	Y	A	D	G	T	D	L	G	V	Y	G	A	H	D	N	V	Y	F	G	R	P	E	D	G	T	L	.	.	.	E	S	E	F	S	G	N	L	V	E	I	C	P	T	G	V	F	T	D	K	T	H
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.
Template Conservation
Template Sequence		N	A	C	G	K	N	T	E	T	Y	A	M	K	F	L	N	K	N	G	K	T	I	I	G	A	E	D	E	K	C	F	D	D	T	N	C	L	L	C	G	Q	C	I	I	A	C	P	V	A	A	L	S	E	K	S	H
Template Known Secondary structure								T	S				S						T	T						S	G	G	G			G	G	G	S	S												S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions