Job Description P0A9U6 Confidence 99.33% Date Thu Jan 5 11:11:25 GMT 2012 Rank 77 Aligned Residues 106 % Identity 18% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	E	P	Q	V	V	I	N	Q	D	D	L	I	E	M	G	S	Q	G	V	S	M	K	L	V	H	N	G	N	P	N	R	T	L	A	M	I	F	E	T	Y	Q	P	G	T	T	T	G	E	R	I	K	H	Q	G	E	E	I	G	T	V	L	E	G	E	I	V	L	T	I	N	G	Q	D	Y	H	L	V
Query Conservation
Alig confidence																																	.	.	.													.
Template Conservation																																	.	.	.													.
Template Sequence		X	Q	Q	S	E	H	F	S	F	G	E	Q	T	E	I	E	D	I	G	G	G	L	K	R	Q	X	L	G	F	N	H	.	.	.	E	L	X	A	V	K	I	W	F	D	K	G	.	A	E	G	Y	V	H	A	H	R	H	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	D	G	V	I	K	V	L	T
Template Known Secondary structure							S				T	T	T	S						S	T	T										T	.	.	.	T										T	T	.									S	S																T	T
Template Predicted Secondary structure																																	.	.	.													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Q	S	Y	A	I	N	T	G	I	P	H	S	F	S	N	T	S	A	G	I	C	R	I	I	S	A	H	T	P	T
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		A	G	D	S	F	F	V	P	P	H	V	D	H	G	A	V	C	P	.	.	T	G	G	I	L	I	D	T	F	S	P	A
Template Known Secondary structure		T	T							T	T								T	.	.	T										S
Template Predicted Secondary structure																				.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions