Return to main results Retrieve Phyre Job Id

Job DescriptionP39379
Confidence2.92%DateThu Jan 5 12:00:11 GMT 2012
Rank8Aligned Residues29
% Identity21%Templated2foka2
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Restriction endonuclease FokI, N-terminal (recognition) domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........
Predicted Secondary structure 






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Query Sequence  LIANLQNTDAAAGMTKELAQEGEITERDK
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Template Sequence  LIEAISSYPPAIRILTLLEDGQHLTKFDL
Template Known Secondary structure  T
TT


Template Predicted Secondary structure 






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   152.......160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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