Return to main results Retrieve Phyre Job Id

Job DescriptionP39379
Confidence1.24%DateThu Jan 5 12:00:11 GMT 2012
Rank32Aligned Residues33
% Identity15%Templatec1ciiA_
PDB info PDB header:transmembrane proteinChain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190.........200........
Predicted Secondary structure 

Query SS confidence 

































Query Sequence  NYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANI
Query Conservation 
      
            
 
  
  

 
 
Alig confidence 

















.














Template Conservation                    .               
Template Sequence  ATALVALVFSILTGSALG. IIGYGLLMAVTGALI
Template Known Secondary structure  TT


.
Template Predicted Secondary structure  .
Template SS confidence 

































   580.........590....... ..600.........610..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions