Job Description P39361 Confidence 95.65% Date Thu Jan 5 11:59:52 GMT 2012 Rank 140 Aligned Residues 138 % Identity 14% Template d2o0ma1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like Resolution 1.60

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.						.
Query SS confidence																																																					.	.	.	.						.
Query Sequence		Q	Y	I	V	N	Q	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E	Y	V	F	D	V	K	R	T	L	Q	S	V	A	K	R	E	I	A	A	L	A	R	T	M	.	.	.	.	I	K	D	G	D	.	C	F	F	L	D	S	G	S	T	C	L	E	L	A	K	C	L	A	D
Query Conservation																																																					.	.	.	.						.
Alig confidence													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.												.	.	.	.						.
Template Conservation													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	X	T	Q	Y	F	G	I	Q	R	.	.	.	.	C	I	V	V	A	G	D	S	D	I	Q	K	K	V	.	.	.	.	.	.	.	.	.	.	.	L	S	D	F	G	D	V	L	T	N	T	L	N	L	L	L	P	N	G	E	N	T	I	A	V	X	G	G	T	T	X	A	X	V	A	E	N	X	G	S
Template Known Secondary structure									T		S		.	.	.	.					S	S		T	T	T		T			.	.	.	.	.	.	.	.	.	.	.																		S										S									T
Template Predicted Secondary structure													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.												.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	K	V	I	C	N	D	I	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	G	G	L	I	R	P	G	Y	F	S	V	G	E	S	L	A	L	E	M	I	N	A	F	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T	M	F	E	V	G	V	K	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Sequence		L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	K	R	H	N	L	F	V	P	A	R	G	G	I	G	E	A	V	S	V	Q	A	N	S	I	S	A	V	X	A	N	K	T	G	G	N	Y	R	A	L	Y	V	P	E	Q	L	.	S	R	E	T	Y	N	S	L	L	Q	E	P	S	I	Q	E
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S								S	B	S						G	G	G	S													T										S	S		.										T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template SS confidence
		164	.															.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	I	Q	R	S	R	E	V	I	L	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	T	L	I	S	H	A	N	C	V	V	H
Template Known Secondary structure								T		S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions