Return to main results Retrieve Phyre Job Id

Job DescriptionP39361
Confidence97.00%DateThu Jan 5 11:59:52 GMT 2012
Rank82Aligned Residues61
% Identity8%Templated2isya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein
Resolution1.96

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.
Predicted Secondary structure 












Query SS confidence 




























































Query Sequence  MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDF
Query Conservation 

 




   

  
     
 
 


    

  





  

      
   

   
Alig confidence 




























































Template Conservation 
  
 



  
  
      
    

  
 

  


 




   


  
    
 
Template Sequence  LVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLEL
Template Known Secondary structure  TSSTT



T

TTS

TTS

Template Predicted Secondary structure 





















Template SS confidence 




























































   4.....10.........20.........30.........40.........50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions