Job Description P39361 Confidence 97.14% Date Thu Jan 5 11:59:52 GMT 2012 Rank 75 Aligned Residues 175 % Identity 14% Template d2gnpa1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like Resolution 1.65

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		R	D	F	Q	Y	I	V	N	Q	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E	Y	V	F	D	V	K	R	T	L	Q	S	V	A	K	R	E	I	A	A	L	A	R	T	M	.	.	.	.	I	K	D	G	D	C	F	F	L	D	S	G	S	T	C	L	E	L	A	K	C	L
Query Conservation																																																								.	.	.	.
Alig confidence											.	.																						.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation											.	.																						.	.	.	.	.	.	.	.
Template Sequence		T	N	X	F	K	L	E	N	Y	.	.	V	K	E	K	Y	S	L	E	S	L	E	I	I	P	N	E	F	D	D	T	P	.	.	.	.	.	.	.	.	T	I	L	S	E	R	I	S	Q	V	A	A	G	V	L	R	N	L	I	D	D	N	X	K	I	G	F	S	W	G	K	S	L	S	N	L	V	D	L	I
Template Known Secondary structure											.	.						T		S									T	T				.	.	.	.	.	.	.	.																					T	T								S
Template Predicted Secondary structure											.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		A	D	A	R	V	K	V	I	C	N	D	I	K	I	A	N	E	L	G	C	F	P	H	V	E	S	Y	I	I	.	G	G	L	I	R	P	G	Y	F	S	V	G	E	S	L	A	L	E	M	I	N	A	F	S	V	E	R	A	F	I	S	C	D	A	L	S	L	E	T	G	I	T	N	A	T	M	F	E	V	G
Query Conservation																															.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	N	V	H	F	Y	P	L	A	G	G	P	S	H	I	H	A	K	Y	H	V	N	T	L	I	Y	E	X	S	R	K	F	H	G	E	C	T	F	X	N	A	T	I	V	Q	E	N	.	.	.	.	.	.	.	.	.	.	K	L
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S						S	B				T	T	S		G	G	G	S													T								S		S	B		S	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.																	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180											.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	R	I	I	Q	R	S	R	E	V	I	L	M	A	D	H	S	K	F	D	A	V	E	P	H	A	V	A	T	L	S	C	I	K	T	I	I	S	D	S	G	L	P	E	T	I	A	Q	R	Y	Q	R	A	G	C
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		L	A	D	G	I	L	Q	S	R	Y	F	E	N	L	K	N	S	W	K	D	L	.	D	I	A	V	V	G	I	G	D	F	S	N	K	G	K	H	Q	W	L	D	X	L	T	E	D	D	F	K	E	L	T	K	V	K	T
Template Known Secondary structure								T	S	T	T	T							T	T	S		.	S										S						T	T	T	T	T	S											T	T
Template Predicted Secondary structure																							.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions