Job Description P39361 Confidence 68.47% Date Thu Jan 5 11:59:52 GMT 2012 Rank 470 Aligned Residues 81 % Identity 11% Template d2f2ea1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like Resolution 1.85

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	L	H	Y	L	W	Q	H	R	H	L	S	T	Q	Q	A	M	E	L	F	G	Y	A	E	A	T	V	R	R	D	F	Q	Y	I	V	N	Q	Y	P	G	M	I	R	G	H	G	C	L	D	F	D	D	S	T	D	D	K	E	Y	V	F	D	V	K	R	T	L	Q	S	V	A	K	R	E	I	A	A	L	A
Query Conservation
Alig confidence									.																																						.	.	.	.	.	.
Template Conservation									.																																						.	.	.	.	.	.
Template Sequence		L	I	V	R	D	A	F	.	E	G	L	T	R	F	G	E	F	Q	K	S	L	G	L	A	K	N	I	L	A	A	R	L	R	N	L	V	E	H	G	V	X	V	A	V	P	.	.	.	.	.	.	A	E	S	G	S	H	Q	E	Y	R	L	T	D	K	G	R	A	L	F	P	L	L	V	A	I	R	Q	W	G
Template Known Secondary structure									.	T	T			S																									T	T	S						.	.	.	.	.	.		S	S	S	S												T	T
Template Predicted Secondary structure									.																																						.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		91	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	M	I	K	D	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	Y	F	F	A	P	D
Template Known Secondary structure					S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions